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Resources on metagenomics and other topics

Adam Howes

Abstract

A compliation of links to resources which I’ve found useful while working on exp-growth.

  • E-detectors: a nonparametric framework for online changepoint detection
  • Bayesian Multinomial Logistic Normal Models through Marginally Latent Matrix-T Processes
  • How good is a PCR efficiency estimate: Recommendations for precise and robust qPCR efficiency assessments
  • Analyzing RNA-seq data with DESeq2
  • Splatter: simulation of single-cell RNA sequencing data
  • ALF—A Simulation Framework for Genome Evolution
  • Latent Dirichlet Allocation for Metagenomics: testing an initial assumption
  • Efficient Markov chain Monte Carlo sampling for hierarchical hidden Markov models
  • Stochastic modelling, Bayesian inference, and new in vivo measurements elucidate the debated mtDNA bottleneck mechanism
  • Bayesian Inference for Absolute Quantification of Mitochondrial DNA
  • The Future of qPCR Webinar Q&A
  • QuantStudio 6 and 7 Flex Real-Time PCR System Software